PR Storm Bi-Level Growth, version 1.0 This behavior was created for Puerto Rico, and is so bizarre that I have included the "PR" in the name to warn off unsuspecting folks. More...

#include <PRStormBiLevelGrowth.h>

Inheritance diagram for clPRStormBiLevelGrowth:

Public Member Functions
	clPRStormBiLevelGrowth (clSimManager *p_oSimManager)
	Constructor. More...

	~clPRStormBiLevelGrowth ()
	Destructor. More...

float	CalcDiameterGrowthValue (clTree p_oTree, clTreePopulation p_oPop, float fHeightGrowth)
	Calculates the amount of diameter growth increase for a particular tree using the appropriate growth equation. More...

void	DoShellSetup (xercesc::DOMDocument *p_oDoc)
	Does the setup for this behavior. More...

Public Member Functions inherited from clGrowthBase
	clGrowthBase (clSimManager *p_oSimManager)
	Constructor. More...

virtual	~clGrowthBase ()
	Destructor. More...

void	Action ()
	Performs all growth calculations if "hooked". More...

virtual float	CalcHeightGrowthValue (clTree p_oTree, clTreePopulation p_oPop, float fDiameterGrowth)
	Calculates the amount of height growth increase for a particular tree, if applicable. More...

virtual float	GetGrowthMemberValue (clTree *p_oTree, float fDiameterGrowth)
	Calculates the value to go into a tree's "Growth" data member as the amount of growth. More...

virtual void	PreGrowthCalcs (clTreePopulation *p_oPop)
	Performs calculations before any DBHs have been changed. More...

growthType	GetGrowthMethod ()
	Gets the method by which this behavior increments growth. More...

clGrowthOrg *	GetGrowthOrg ()
	Get the growth org object. More...

void	RegisterTreeDataMembers ()
	Performs data member registrations for "Growth". More...

Public Member Functions inherited from clBehaviorBase
virtual float	GetBehaviorVersion ()
	Gets the behavior version number. More...

	clBehaviorBase (clSimManager *p_oSimManager)
	Constructor. More...

virtual	~clBehaviorBase ()
	Destructor. More...

virtual short int	ValidateVersionNumber (float fTestVersion)
	Makes sure that the version number of a file passed is between the minimum and current version numbers. More...

virtual void	SetSpeciesTypeCombos (short int iNumCombos, stcSpeciesTypeCombo *p_whatCombos)
	Sets the species/type combos for a behavior. More...

virtual void	SetNameData (std::string sNameString)
	Sets the string for the parameter file behavior. More...

virtual short int	GetNewTreeInts ()
	Gets the number of new tree integer data members this behavior wants to register. More...

virtual short int	GetNewTreeFloats ()
	Gets the number of new tree float data members this behavior wants to register. More...

virtual short int	GetNewTreeChars ()
	Gets the number of new tree character data members this behavior wants to register. More...

virtual short int	GetNewTreeBools ()
	Gets the number of new tree bool data members this behavior wants to register. More...

virtual short int	GetNumSpeciesTypeCombos ()
	Gets the number of species/type combos to which this behavior applies. More...

virtual short int	GetNumBehaviorSpecies ()
	Gets the number of unique tree species to which this behavior applies. More...

struct stcSpeciesTypeCombo	GetSpeciesTypeCombo (short int iIndex)
	Gets one of this behavior's type/species combos. More...

virtual short int	GetBehaviorSpecies (short int iIndex)
	Gets one of the behavior's species. More...

short int	GetBehaviorListNumber ()
	Gets the behavior list number for this behavior, which differentiates between multiple copies of the behavior in the behavior list. More...

void	SetBehaviorListNumber (short int iNumber)
	Sets the behavior list number for this behavior, which differentiates between multiple copies of the behavior in the behavior list. More...

std::string	FormatSpeciesTypeQueryString ()
	Formats the string for species/types query. More...

virtual DOMElement *	GetParentParametersElement (xercesc::DOMDocument *p_oDoc)
	This will get the correct set of parameters for this behavior based on the behavior list position number. More...

Public Member Functions inherited from clWorkerBase
	clWorkerBase (clSimManager *p_oSimManager)
	Constructor. More...

virtual	~clWorkerBase ()
	Destructor. More...

std::string	GetName ()
	Gets the object's namestring. More...

clSimManager *	GetSimManager ()

void	DoObjectSetup (xercesc::DOMDocument *p_oDoc, fileType iFileType)
	Triggers the setup process. More...

virtual void	TimestepCleanup ()
	Performs any necessary cleanup operations at the end of a timestep. More...

virtual void	EndOfRunCleanup ()
	Performs any necessary cleanup operations at the end of a run. More...

Protected Attributes
clGrid *	mp_oStormLight
	"Storm Light" grid object More...

clGrid *	mp_oStorm
	"Storm Damage" grid object More...

double *	mp_fLoLightSlope
	Slope of growth equation in low light - b - sized number of behavior species. More...

double *	mp_fLoLightIntercept
	Intercept of growth equation in low light - a - sized number of behavior species. More...

double *	mp_fHiLightA
	High light growth equaiton "a" - sized number of behavior species. More...

double *	mp_fHiLightB
	High light growth equaiton "b" - sized number of behavior species. More...

double *	mp_fHiLightThreshold
	Threshold between low light and high light growth, as a value between 0 and 100 - sized number of behavior species. More...

int *	mp_iIndexes
	To help access the other arrays. More...

int	m_iYearsPerTimestep
	Conversion factor to translate the results of the function to the appropriate units per timestep. More...

int	m_iLightCode
	Minimum size of seedling, to avoid setting smaller than this. More...

int	m_iStormtimeCode
	Code for the "stormtime" data member of the "Storm Damage" grid. More...

Protected Attributes inherited from clGrowthBase
growthType	m_iGrowthMethod
	The method by which this object plans to update tree dimensions. More...

float	m_fConvertCmPerTSToMmPerYr
	Conversion factor from cm diameter growth per timestep to mm radial growth per year. More...

float	m_fConvertMmPerYearToCmPerTS
	Conversion factor to take amounts from mm of radial growth per year to cm of diameter growth per timestep. More...

bool	m_bHooked
	Wwhether or not this shell object is hooked to clGrowthOrg. More...

bool	m_bGoLast
	Whether or not this behavior's growth should go last when used with a complementary growth behavior. More...

Protected Attributes inherited from clBehaviorBase
short int	m_iNumSpeciesTypeCombos
	How many type/species combos a behavior will act on. More...

short int	m_iNumBehaviorSpecies
	How many distinct species are in the combo list - important for filling species-specific values from parameter file. More...

short int *	mp_iWhatSpecies
	List of distinct species - for filling species-specific values from parameter file. More...

stcSpeciesTypeCombo *	mp_whatSpeciesTypeCombos
	Array of species/type combos that the behavior will act on. More...

short int	m_iNewTreeInts
	The number of new tree integer data members this behavior wants to add. More...

short int	m_iNewTreeFloats
	The number of new tree float data members this behavior wants to add. More...

short int	m_iNewTreeChars
	The number of new tree character data members this behavior wants to add. More...

short int	m_iNewTreeBools
	The number of new tree boolean data members this behavior wants to add. More...

short int	m_iBehaviorListNumber
	The number of this behavior in the behavior list, to differentiate between possible multiple copies of this behavior. More...

float	m_fVersionNumber
	Version number - this will be rounded to 2 digits after the decimal place. More...

std::string	m_sXMLRoot
	XML root that encloses the parameters for this behavior. More...

float	m_fMinimumVersionNumber
	Minimum version number - this behavior will run parameter data for a file marked between this number and the current version number, inclusive. More...

Protected Attributes inherited from clWorkerBase
std::string	m_sNameString
	If a behavior has registered a command line command with the sim manager, this allows it to be called. More...

clSimManager *	mp_oSimManager
	Pointer to the simulation manager object. More...

int *	mp_iAllowedFileTypes
	List of the input file types this object can handle. More...

int	m_iNumAllowedTypes
	Number of input file types this object can handle. More...

Additional Inherited Members
Public Types inherited from clGrowthBase
enum	growthType { diameter_auto, diameter_only, height_only }
	Values describing the method by which the object instance of this class plans to implement tree growth. More...

Protected Member Functions inherited from clGrowthBase
void	GetData (xercesc::DOMDocument *p_oDoc)
	Triggers all growth setup if an object is hooked. More...

Protected Member Functions inherited from clWorkerBase
void	AssembleFileCode (int iFileType, int iFileVersion, char *cCode)
	Creates the proper identifying filecode for an XML file. More...

Static Protected Attributes inherited from clGrowthBase
static clGrowthOrg *	mp_oGrowthOrg
	clGrowthOrg object - this pointer is held in common by all shells More...

Detailed Description

PR Storm Bi-Level Growth, version 1.0 This behavior was created for Puerto Rico, and is so bizarre that I have included the "PR" in the name to warn off unsuspecting folks.

This behavior increments growth using one of two equations, one for low light levels and one for high light levels.

The equation used for low light levels is:

Y = a + b * diam

where

Y = diameter growth in cm/year
a = growth intercept
b = growth slope
diam = diam10 for seedlings and saplings, or DBH for adults

The equation used for high light levels is:

H = a * diam * exp(-b * N)

where

H = height growth in cm/year
a and b = parameters
diam = diam10 for seedlings and saplings, or DBH for adults
N = number of years since the last storm, from the "Storm Damage" grid

Note that the high-light equation calculates height growth, while the low-light equation calculates diameter growth. If the high-light equation is used, the amount of height growth is transformed into an amount of diameter growth with the help of the clAllometry class. Because of this arrangement, this behavior refuses to act as a diam only incrementer.

This behavior gets its light levels from the "Storm Light" grid object produced by clStormLight. It gets the number of years since the last storm from the "Storm Damage" grid object produced by clStorm. Both of these grids, and thus the behaviors that create them, are required.

The name string is "prstormbilevelgrowthshell". In the parameter file, call "PRStormBilevelGrowth".

Author: Lora E. Murphy

Edit history:
--------------—
October 20, 2011 - Wiped the slate clean for SORTIE 7.0 (LEM)
March 17, 2015 - Trapped for setting growth too small (LEM)

Constructor & Destructor Documentation

◆ clPRStormBiLevelGrowth()

clPRStormBiLevelGrowth::clPRStormBiLevelGrowth ( clSimManager * p_oSimManager )

Constructor.

Sets the namestring.

◆ ~clPRStormBiLevelGrowth()

clPRStormBiLevelGrowth::~clPRStormBiLevelGrowth ( )

Destructor.

Frees memory.

Member Function Documentation

◆ CalcDiameterGrowthValue()

float clPRStormBiLevelGrowth::CalcDiameterGrowthValue	(	clTree *	p_oTree,
		clTreePopulation *	p_oPop,
		float	fHeightGrowth
	)

virtual

Calculates the amount of diameter growth increase for a particular tree using the appropriate growth equation.

First this retrieves the light level in the tree's grid cell. If it is above the threshold, the high-light equation used. If it is below the threshold, the low-light equation is used.

In the case of tree life-history-stage transitions due to high-light height growth, this isn't going to be too smart. It will calculate a new height, then back-calculate a diameter, then return the difference between the existing and new diamter.

Parameters

p_oTree	Tree for which to calculate growth.
p_oPop	Tree population object, just in case it's needed.
fHeightGrowth	Amount of height growth, in m (ignored).

Returns: Amount, in cm, by which to increase the tree's diameter.

Reimplemented from clGrowthBase.

◆ DoShellSetup()

void clPRStormBiLevelGrowth::DoShellSetup ( xercesc::DOMDocument * p_oDoc )

virtual

Does the setup for this behavior.

This reads in the parameters from the parameter file, and retrieves the "Storm Light" grid if present.

Parameters

p_oDoc Parsed parameter file.

Exceptions

modelErr

if:

the high-light growth threshold is not between 0 and 100;
the storm behavior is missing (no "Storm Damage" grid); or
the storm light behavior is missing (no "Storm Light" grid)

Reimplemented from clGrowthBase.

Member Data Documentation

◆ m_iLightCode

int clPRStormBiLevelGrowth::m_iLightCode

protected

Minimum size of seedling, to avoid setting smaller than this.

Code for the "Light" data member of the "Storm Light" grid

◆ m_iStormtimeCode

int clPRStormBiLevelGrowth::m_iStormtimeCode

protected

Code for the "stormtime" data member of the "Storm Damage" grid.

◆ m_iYearsPerTimestep

int clPRStormBiLevelGrowth::m_iYearsPerTimestep

protected

Conversion factor to translate the results of the function to the appropriate units per timestep.

◆ mp_fHiLightA

double* clPRStormBiLevelGrowth::mp_fHiLightA

protected

High light growth equaiton "a" - sized number of behavior species.

◆ mp_fHiLightB

double* clPRStormBiLevelGrowth::mp_fHiLightB

protected

High light growth equaiton "b" - sized number of behavior species.

◆ mp_fHiLightThreshold

double* clPRStormBiLevelGrowth::mp_fHiLightThreshold

protected

Threshold between low light and high light growth, as a value between 0 and 100 - sized number of behavior species.

◆ mp_fLoLightIntercept

double* clPRStormBiLevelGrowth::mp_fLoLightIntercept

protected

Intercept of growth equation in low light - a - sized number of behavior species.

◆ mp_fLoLightSlope

double* clPRStormBiLevelGrowth::mp_fLoLightSlope

protected

Slope of growth equation in low light - b - sized number of behavior species.

◆ mp_iIndexes

int* clPRStormBiLevelGrowth::mp_iIndexes

protected

To help access the other arrays.

◆ mp_oStorm

clGrid* clPRStormBiLevelGrowth::mp_oStorm

protected

"Storm Damage" grid object

◆ mp_oStormLight

clGrid* clPRStormBiLevelGrowth::mp_oStormLight

protected

"Storm Light" grid object

The documentation for this class was generated from the following file:

PRStormBiLevelGrowth.h

Public Member Functions

Protected Attributes

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ clPRStormBiLevelGrowth()

◆ ~clPRStormBiLevelGrowth()

Member Function Documentation

◆ CalcDiameterGrowthValue()

◆ DoShellSetup()

Member Data Documentation

◆ m_iLightCode

◆ m_iStormtimeCode

◆ m_iYearsPerTimestep

◆ mp_fHiLightA

◆ mp_fHiLightB

◆ mp_fHiLightThreshold

◆ mp_fLoLightIntercept

◆ mp_fLoLightSlope

◆ mp_iIndexes

◆ mp_oStorm

◆ mp_oStormLight